Species	Tissue	CellType	Marker	Resource
Human	Bone marrow	Adult endothelial progenitor cell	CD34, PECAM1, PROM1, CDH5, FLT3, KDR, KIT, NANOG, THY1	27110541, 25965197, 21672077
Human	Bone marrow	Alternatively activated macrophage	CD163, MRC1, ARG1, CCL2, IL10, RETNLB	29022575, 27976373
Human	Bone marrow	B cell	MS4A1, CD19, CD79A, CD24, MME, PAX5, BANK1, BCL2, BCL6, CD34, CD5, CD74, FCER2, GCSAM, HLA-DR family, LMO2, MB2 family	33409501, 33287869, 32214235, 34803492, 35937796, 32199615, 35974106, 33646886, 35732626, 36131282, 16181617, 23575078, 21502424, 12360049, 9226174, 1592393, 2365993, 6952922, 30364725
Human	Bone marrow	CD14-low, CD16-positive monocyte	FCGR3A, MS4A7	35974106, 33646886
Human	Bone marrow	CD14-positive monocyte	CD14, CD68, NCF1	33409501, 35937796, 35974106
Human	Bone marrow	CD14-positive, CD16-positive monocyte	CD68, FCGR3A	33409501
Human	Bone marrow	CD16-negative natural killer cell	CD160, GNLY, NKG7	35549406
Human	Bone marrow	CD16-negative, CD56-bright natural killer cell, human	CD44, CMC1, GZMK, IL7R, KLRC1, LTB, NFKBIA, SELL, XCL1, XCL2	33409501, 31477722
Human	Bone marrow	CD16-positive natural killer cell	FCGR3A, GNLY, NKG7	35549406
Human	Bone marrow	CD4-positive, alpha-beta memory T cell	CCR7	35974106
Human	Bone marrow	CD8-positive, alpha-beta T cell	CCL5, CD8A, CD8B	33287869, 33646886, 32325141
Human	Bone marrow	Central memory CD4-positive, alpha-beta T cell	CCR7, CD4, SELL	35549406
Human	Bone marrow	Central memory CD8-positive, alpha-beta T cell	CCR7, CD8A, SELL	35549406
Human	Bone marrow	Classical monocyte	CD14, S100A12, S100A9	35549406
Human	Bone marrow	Common dendritic progenitor	CLEC10A, IRF8, PCLAF	35549406
Human	Bone marrow	Common lymphoid progenitor	CD24, IRF4, PCDH9, TCL1A	33646886, 35073399, 32325141
Human	Bone marrow	Common myeloid progenitor	CD38, CTSG, FLT3, MPO	35549406, 30157427, 35073399
Human	Bone marrow	Conventional dendritic cell	CD1C, CLEC10A, CLEC9A, FCER1A	35974106, 33646886, 36131282
Human	Bone marrow	Dendritic cell	CD1C, IRF8, CCR2, CD1A, CD40, CD74, CD80, CD86, HLA-DPA1, HLA-DPB1, HLA-DRA, HLA-DRB1, IGKC, ITGAX, MHC class II, MPEG1, SPIB	35792218, 32214235, 35937796, 31160568, 27809931, 28338898, 10661571
Human	Bone marrow	Dendritic cell, human	CLEC10A, FCER1A, S100A9	35549406
Human	Bone marrow	Double negative thymocyte	CD99, FXYD2, HES1	35549406
Human	Bone marrow	Double-positive, alpha-beta thymocyte	CD1A, CD8A, SMPD3	35549406
Human	Bone marrow	Early erythroid progenitor cell	CD36	35974106, 36131282
Human	Bone marrow	Early lymphoid progenitor	SELL, AVP, CD38, CD52, CRHBP, CSF3R, FLT3, FOSL2, LTB, MME, NBL1, PCDH9, PTPRC, RUNX2, TSC22D2	35549406, 32997960, 34042332, 29545397
Human	Bone marrow	Early pro-B cell	DNTT	33218352
Human	Bone marrow	Effector CD8-positive, alpha-beta T cell	CD8A	35974106
Human	Bone marrow	Effector memory CD4-positive, alpha-beta T cell	AQP3, ITGB1, KLRB1	35549406
Human	Bone marrow	Effector memory CD8-positive, alpha-beta T cell	CCL5, CD8A, CXCR6, GZMK, ITGA1, ITGAE	35549406
Human	Bone marrow	Effector memory CD8-positive, alpha-beta T cell, terminally differentiated	CX3CR1, GNLY, GZMB	35549406
Human	Bone marrow	Endothelial cell	PECAM1, PLVAP, AQP1, CD34, CDH5, CXCR4, FLT1, KDR, KIT, MCAM, PGF, RAMP2, S1PR1, S1PR2, S1PR3, S1PR4, S1PR5, SELE, SELP, TEK, VCAM1	34719426, Company, 12459053
Human	Bone marrow	Epithelial cell	CD14, EPCAM, PTPRC	26287250
Human	Bone marrow	Erythroblast	AHSP, HBD, HBM, PRDX2	33646886
Human	Bone marrow	Erythrocyte	HBA1, HBB, HBA2, CA1, HBD, HBM, AHSP, KLF1, ALDH family, CD36, GYPA, HBG2, MKI67, PRDX2, STMN1, TFR2, TYMS	33287869, 32214235, 34803492, 35937796, 31160568, 32199615, 35974106, 34719426, 18510759
Human	Bone marrow	Erythroid progenitor cell	GATA1, BLVRB, AHSP, BIRC5, CR1, FOSL2, KLF1, MCM4, MKI67, NPM1, RPS19, SHMT2, UROD	35792218, 32214235, 32997960, 35073399, 35534476, 12459053, 25582385
Human	Bone marrow	Granule cell precursor	AZU1, ELANE, MPO, PRSS57, PRTN3	33646886
Human	Bone marrow	Granulocyte	AZU1, CPA3, CSF1R, CTSG, ELANE, KIT, LYZ, MPO, PRTN3, SLC45A3	35549406, 31160568
Human	Bone marrow	Granulocyte monocyte progenitor cell	MPO, AZU1, CCR2, CD38, CTSA, ELANE, IRF8, LY86, LYZ, PRTN3	35549406, 35792218, 30157427, 33919312, 35974106, 32997960, 34719426, 36131282, 32325141
Human	Bone marrow	Granulocytopoietic cell	CLC, SRGN, CPA3, CXCL10, EPX, GCH1, HDC, PRG2, SOD2, TNFAIP6	34042332
Human	Bone marrow	Helper T cell	CCR4, CCR6	21338515
Human	Bone marrow	Hematopoietic stem cell	CD34, THY1, CASP3, CD38, CRHBP, ENG, KDR, KIT, PROM1, SLAMF1, ABCG2, AVP, BMI1, CD44, CD48, CD93, CXCR4, FLT3, GFI1, HLF, IL7R, MCL1, MYB, PTEN, PTPRC, STAT5A, STAT5B, VCAM1, A4GALT, ABCB1, ADGRG6, ALDH family, ALDH1A1, CALR, CCL3L3, CD244, CD33, CDCP1, CXCL2, CXCL8, DUSP1, ELANE, EPOR, ESAM, GATA2, HDC, HOXA10, ITGA2B, ITGA6, JUN, KITLG, LDHB, LTB, MECOM, MPL, MYC, NFKBIA, NGFR, PCDH9, PDGFRB, PECAM1, PODXL, PROCR, PROM2, RPL4, RPS2, RPS4Y1, RPS5, RPSA, SPI1, SPIB, SPINK2, TEK, TSHZ2, ZBTB16	33409501, 35792218, 33919312, 31160568, 32199615, 35974106, 32997960, 35732626, 35073399, 36131282, 34042332, Company, 24886724, 12459053, 18510759
Human	Bone marrow	Immature B cell	CD79A, MME, VPREB1	33218352, 34719426
Human	Bone marrow	Immature conventional dendritic cell	AXL, CLEC10A, KLF4	35549406
Human	Bone marrow	Immature natural killer cell	CCL5, FCGR3A, GZMK	35549406
Human	Bone marrow	Immature neutrophil	MPO	33409501
Human	Bone marrow	Langerhans cell	CD1A, CD207, CDH1, EPCAM, TACSTD2	29313948
Human	Bone marrow	Large pre-B cell	CD24, MKI67, MME	35549406
Human	Bone marrow	Late erythrocyte	GYPA, GYPB, HBA1, KLF1	35549406, 35974106
Human	Bone marrow	Macrophage	CD68, CD14, CSF1R, ADGRE1, C1QA, MRC1, AIF1, ARG1, C1QB, C1QC, CD163, CD36, CD4, CEBPD, CFP, CLEC12A, COTL1, CST3, CTSB, CTSC, CTSS, CXCL10, CXCL8, CXCR2, CYBB, DUSP6, FCER1G, FCGR3A, FCN1, FGL2, FOS, FTH1, FTL, GPX1, GRN, HMOX1, IFI30, IFITM3, IRF5, ITGAM, ITGB2, LILRA5, LILRB2, LIPA, LST1, LYZ, MAFB, MNDA, MS4A6A, MS4A7, NEAT1, NPC2, PELATON, PSAP, S100A12, S100A8, S100A9, SAT1, SERPINA1, SOCS3, SPI1, TIMP1, TREM2, TYMP, TYROBP, VCAN	33287869, 35549406, 35792218, 35937796, 35974106, 32325141, 26287250, 28904023, 29762983, 19492422, 8142648
Human	Bone marrow	Macrophage dendritic cell progenitor	IL3RA, AXL, CD22, CD33, CD34, CLEC4C, CSF1R, CSF2RA, CX3CR1, FLT3, KIT, PTPRC, SIGLEC1, SIGLEC6	26292072, 29313948
Human	Bone marrow	Mast cell	KIT, IL2RA, CD2, CPA3, ENPP3, FCER1A, TPSAB1, TPSB2	35549406, 32325141, 26914980, 22790101, 20591187, 11381374, 10498606
Human	Bone marrow	Mast cell progenitor	TFRC	29545397
Human	Bone marrow	Mature B cell	BANK1, MS4A1	34719426
Human	Bone marrow	Mature megakaryocyte	CD48, PTPRJ	34042332
Human	Bone marrow	Mature NK T cell	GNLY, NKG7, CD8A, KLRD1, MZB1	35549406, 34719426
Human	Bone marrow	Megakaryocyte	ITGA2B, PF4, GP1BA, PPBP, APOE, AXIN1, CA1, CCND1, CD36, CD9, CDC20, CDK6, CILK1, CMTM5, CNRIP1, CTNNBL1, DDIT3, DSTN, GFI1, GP6, GP9, HBA1, HBA2, HBB, HLA-DRA, HLA-DRB1, HMGA1, IL1B, ITGB3, KLF1, MCM7, MT-ND4, MXD1, P2RY1, PCNA, PLEK, PTPRC, RACK1, S100A9, SRM, TCEA2, THBS1, TMEM41B, TTK, TUBB1, VWF	35549406, 31160568, 32422235, 33218352, 33301706, 33384332, 34042332
Human	Bone marrow	Megakaryocyte progenitor cell	ITGA2B, PLEK, CAVIN1, CMTM5, DAD1, F2R, GATA2, HBD, PF4, PRSS57, SELP, UBE2C	35549406, 32199615, 32997960, 35073399, 34042332
Human	Bone marrow	Megakaryocyte-erythroid progenitor cell	GATA2, GATA1, ITGA2B, LMO4	35549406, 33919312, 32997960, 35073399
Human	Bone marrow	Memory B cell	CD27, CR2, MS4A1, SEC11C, XBP1	35549406, 34719426
Human	Bone marrow	Mesenchymal cell	NT5E, THY1, ENG, CD34, CD44, PTPRC, NGFR, PECAM1, SUSD2, ALPL, ANPEP, B2M, BSG, CD14, CD151, CD19, CD276, CD47, CD59, CD81, CSPG4, FAP, HLA-ABC family, IL6ST, ITGB1, KIT, LIFR, SLC3A2, VIM	34736534, 29338788, 27989346, 23572135, 18510677, 16977637, 19462316, 23406305, 27110541, 26303631, 26086188, 25992577, 24405801
Human	Bone marrow	Mesenchymal stem cell	ENG, THY1, NT5E, PTPRC, NGFR, CD34, ITGB1, ALCAM, CD44, ANPEP, MCAM, CASP3, CD14, HLA-DR family, LEPR, MME, AAMP, CD19, CD200, CD4, CD63, CD74, CXCR4, ECE1, EDF1, EPAS1, FLT1, GYPA, GYPB, HBA1, HLA-ABC family, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, IL6ST, ITGA1, ITGA2, ITGA6, ITGAM, ITGAV, ITGB5, NANOG, NES, PDGFRA, POU5F1, PROM1, SUSD2, TEK, VCAM1, VEGFA, VEGFC	30484393, 33333228, 34803492, 29552046, 29118937, 23942284, 23766770, 26013602, 26356872, 21478116, 29137121, 22567895, 23406305, 26410417, 26184166, 19549397, 22118886, 19796241, 29078802, 26687821, 24170370, 23881068, 27141940, 18729797, 31053728, 30507955, 30229373
Human	Bone marrow	Monocyte	CD14, FCGR3A, S100A9, LYZ, CD68, CSF1R, FCGR3B, FCN1, VCAN, ADGRE1, CD163, CD36, CXCL8, CXCR2, MRC1, MS4A6A, S100A12, S100A8, AIF1, ANXA2, C1QA, C1QB, C1QC, CEBPD, CFP, CLEC12A, COTL1, CST3, CTSB, CTSS, CYBB, DUSP6, FCER1G, FGL2, FOS, FTH1, FTL, GPX1, GRN, HMOX1, IFI30, IFITM3, LILRA5, LILRB2, LIPA, LST1, MAFB, MNDA, MS4A7, NEAT1, NPC2, PECAM1, PELATON, PSAP, SAT1, SERPINA1, SPI1, TIMP1, TYMP, TYROBP	33287869, 35549406, 35792218, 34803492, 31160568, 32199615, 33646886, 36131282, 32325141, 12459053, 25369328, 16635794, 25852821
Human	Bone marrow	Monocyte-derived dendritic cell	CD1A, CD1C, CD209, ITGAX, MRC1, S100A8, S100A9, SIRPA	29313948
Human	Bone marrow	Mononuclear phagocyte	C1QC, HMOX1, TYROBP	35549406
Human	Bone marrow	Mucosal invariant T cell	KLRB1, SLC4A10, TRAV1-2	35549406
Human	Bone marrow	Myelocyte	CSTA, FTL, S100A8	35549406
Human	Bone marrow	Myeloid dendritic cell	CD1C, FCER1A, BTLA, CADM1, CD2, CD226, CLEC10A, CLEC4A, CLEC9A, DPP4, ITGAM, ITGAX, LILRA2, SIRPA, THBD, XCR1	33409501, 29313948
Human	Bone marrow	Myeloid lineage restricted progenitor cell	CSF1R, FCGR1A, IL3RA	35484408, 35073399
Human	Bone marrow	Naive B cell	IGHD, IGHM, TCL1A	35549406
Human	Bone marrow	Naive T cell	CCR5, CCR7, PTPRC	23044634
Human	Bone marrow	Naive thymus-derived CD4-positive, alpha-beta T cell	IL7R	35974106
Human	Bone marrow	Naive thymus-derived CD8-positive, alpha-beta T cell	NELL2	35974106
Human	Bone marrow	Natural killer cell	GNLY, NKG7, CX3CR1, KLRD1, KLRF1, NCAM1, ADGRG1, AREG, CCL3, CD3D, CD7, CXCR4, DDIT4, FCGR3A, FGFBP2, GIMAP7, GZMB, IFI16, IFI44L, KLRC1, LAIR2, LGALS1, MAP3K8, MYOM2, MZB1, PTCH2, PTGDS, RGS2, WDR74, XCL2, ZFP36	33409501, 35549406, 34803492, 33218352, 32199615, 35974106, 33646886, 35210612, 34719426, 36131282, 31477722, 32325141
Human	Bone marrow	Neutrophil	S100A8, S100A9, ELANE, MPO, CEACAM8, CSF3R, CST3, CSTA, CSTB, CTSG, DEFA3, DEFA4, FCGR3A, FCGR3B, ITGAM, LYZ, MMP8, PLAC8, RNASE2, SORL1, VAMP8, VIM	32214235, 34803492, 32561858, 35937796, 31160568, 32199615, 34042332
Human	Bone marrow	Neutrophil progenitor cell	MPO, CEACAM8, CENPF, DEFA3, LYZ, SERPINB1, TOP2A	35549406, 35792218, 30157427, 32997960
Human	Bone marrow	Non-classical monocyte	CX3CR1, FCGR3A, C1QA, FCGR3B, SECISBP2L	35549406, 29313948
Human	Bone marrow	Osteoblast	ALPG, ALPL, C1S, LUM	35937796, 34719426, 10457267, 23935020
Human	Bone marrow	Osteoclast	MMP9, SPP1	34719426
Human	Bone marrow	Pericyte	ACTA2, RGS5	34719426
Human	Bone marrow	Plasma cell	SDC1, CD79A, IGHA2, IGKC, JCHAIN, LAIR1, CD27, DERL3, ICAM1, IGHA1, IGHG1, IGHG2, IGHG4, IGHGP, KIT, LY9, TNFRSF17	33287869, 32214235, 32199615, 35974106, 33646886, 36131282, 32325141, 15512818, 26130131, 24689045, 24385542, 14983940, 11933459, 10667416
Human	Bone marrow	Plasmablast	JCHAIN, MZB1, XBP1	35549406
Human	Bone marrow	Plasmacytoid dendritic cell	LILRA4, CLEC4C, FCER1A, IL3RA, IRF7, IRF8, JCHAIN, LILRB4, NRP1, PLD4, PTPRS, TCF4, TNFRSF21	33409501, 33218352, 32199615, 35974106, 33646886, 34719426, 36131282, 29313948
Human	Bone marrow	Plasmacytoid dendritic cell, human	IL3RA, LILRA4, PLD4	35549406
Human	Bone marrow	Platelet	PECAM1	12459053
Human	Bone marrow	Preadipocyte	MGP, ADIPOQ, APOD	34803492
Human	Bone marrow	Precursor B cell	DNTT, IGLL1, LTB, VPREB1, VPREB3	33409501, 33646886, 32997960
Human	Bone marrow	Preosteoblast	ALPL, COL1A1, MCAM	34803492
Human	Bone marrow	Pro-B cell	CD79A, CD79B, DNTT, MME, CD19, CD74, EBF1, HLA-DRA, ID3, IGHM, IGLL1, MS4A1, TCL1A, VPREB3	35549406, 33919312, 33218352, 36131282, 34042332
Human	Bone marrow	Progenitor cell	CD34, BAALC, CDK6, PROM1, SOX4, SPINK2	32997960, 34719426, 36131282, 21574524, 16707957, 14585369
Human	Bone marrow	Promonocyte	FOS, LGALS1, LYZ, MNDA, MT-CO3, S100A8, S100A9	36131282
Human	Bone marrow	Promyelocyte	CTSG, ELANE, MPO	35549406, 32325141
Human	Bone marrow	Regulatory T cell	FOXP3, IL2RA, CCR4, CCR6, CCR7, CD27, CD4, CTLA4, IKZF4	35549406, 21338515, 22016675
Human	Bone marrow	Small pre-B cell	CD24, IGLL5, MME	35549406
Human	Bone marrow	Stem cell	CD34, MYCN, PBX1	32422235, 33218352, 30776444
Human	Bone marrow	Stromal cell	ENG, THY1, NT5E, ALCAM, ANPEP, BST2, CD34, CD44, CXCL12, ITGA1, ITGB1, LAMC2, MCAM, MME, NGFR, PTPRC	31242503, 33218352, 12358928, 28295901, 26184166, 20446813, 17067679
Human	Bone marrow	T cell	CD3D, CD3E, CD3G, TRAC, TRBC1, TRBC2, CCR7, CD8A, GNG4, IL7R, KLRF1, LTB, NKG7, PDCD1, RPSA, ZNF683	33409501, 33287869, 35549406, 32214235, 34803492, 35937796, 32199615, 33646886, 35210612, 34719426, 36131282, 31477722, 23575078
Human	Bone marrow	T follicular helper cell	CXCR5, ICOS, PDCD1	35549406
Human	Bone marrow	T-helper 1 cell	CCL5, CXCR3, TBX21	35549406
Human	Bone marrow	T1 B cell	CD19, CD40LG, IgD family, MME, PTPRC	23731328
Human	Bone marrow	T2 B cell	CD19, CD40LG, IgD family, MME, PTPRC	23731328
Human	Bone marrow	Transitional stage B cell	CD19, CD24, CD40LG, IgD family, MME, MS4A1, MYO1C, PTPRC	35549406, 23731328
Human	Bone marrow	Type 1 conventional dendritic cell	BATF3, CADM1, CLEC9A	35549406
Human	Bone marrow	Type 2 conventional dendritic cell	CD1C, CLEC10A, FCER1A	35549406